EnhancerDB
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  3. rs543415419[chr19:11058459]
Enhancers that have rs543415419[chr19:11058459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543415419[chr19:11058459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11058100 11058566 TCF7L2 GTRD no Colon (HCT116) 21849293
chr19 11058117 11059101 ZNF143 GTRD no Epithelial (MCF-7) 21849294
chr19 11058132 11058987 TCF7L2 GTRD no Colon (HCT116) 21849295
chr19 11058355 11058992 ZNF143 GTRD no Epithelial (MCF-7) 21849296
chr19 11058385 11059066 ZNF274 GTRD no Bone Marrow (K562) 21849297
chr19 11058453 11058466 DUXA JASPAR yes 112448013
chr19 11058454 11058465 DUX4 JASPAR yes 112448014
Genes associated with rs543415419[chr19:11058459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More