EnhancerDB
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  3. rs543466686[chr3:176861546]
Enhancers that have rs543466686[chr3:176861546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 176855125 176871295 enh7690
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543466686[chr3:176861546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 176861535 176861550 MEF2A JASPAR yes 7838598
chr3 176861536 176861546 POU6F2 JASPAR yes 7838599
chr3 176861537 176861547 EMX2 JASPAR yes 7838600
chr3 176861537 176861547 EVX1 JASPAR yes 7838601
chr3 176861537 176861547 EVX2 JASPAR yes 7838602
chr3 176861537 176861547 HESX1 JASPAR yes 7838603
chr3 176861537 176861547 HOXA2 JASPAR yes 7838604
chr3 176861537 176861547 HOXB2 JASPAR yes 7838605
chr3 176861537 176861547 LHX2 JASPAR yes 7838606
chr3 176861537 176861547 MEOX1 JASPAR yes 7838607
chr3 176861537 176861547 MEOX2 JASPAR yes 7838608
chr3 176861537 176861547 MNX1 JASPAR yes 7838609
chr3 176861537 176861549 MEF2A JASPAR yes 7838610
chr3 176861537 176861549 MEF2B JASPAR yes 7838611
chr3 176861537 176861549 MEF2D JASPAR yes 7838612
chr3 176861538 176861546 LBX1 JASPAR yes 7838613
chr3 176861538 176861546 PDX1 JASPAR yes 7838614
chr3 176861538 176861546 VAX1 JASPAR yes 7838615
chr3 176861538 176861546 VAX2 JASPAR yes 7838616
chr3 176861538 176861546 VSX1 JASPAR yes 7838617
chr3 176861538 176861546 VSX2 JASPAR yes 7838618
chr3 176861538 176861548 MEF2A JASPAR yes 7838619
chr3 176861539 176861550 NFIL3 JASPAR yes 7838620
chr3 176861539 176861550 PHOX2A JASPAR yes 7838621
chr3 176861539 176861550 PROP1 JASPAR yes 7838622
chr3 176861540 176861552 DBP JASPAR yes 7838623
chr3 176861540 176861552 HLF JASPAR yes 7838624
chr3 176861540 176861552 TEF JASPAR yes 7838625
chr3 176861542 176861553 NFIL3 JASPAR yes 7838626
chr3 176861545 176861549 TEAD2 TRANSFAC yes 7838627
Genes associated with rs543466686[chr3:176861546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More