EnhancerDB
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  3. rs543494769[chr1:218634039]
Enhancers that have rs543494769[chr1:218634039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 218626305 218642655 enh27510
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543494769[chr1:218634039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 218633187 218634223 ZNF143 GTRD no Epithelial (MCF-7) 21380759
chr1 218633187 218634223 ZNF143 GTRD no Epithelial (MCF-7) 107870283
chr1 218634031 218634041 EN2 JASPAR yes 35381502
chr1 218634031 218634041 LBX2 JASPAR yes 35381503
chr1 218634032 218634040 LHX9 JASPAR yes 35381504
chr1 218634032 218634040 SHOX JASPAR yes 35381505
Genes associated with rs543494769[chr1:218634039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More