EnhancerDB
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  3. rs543519978[chr6:30730697]
Enhancers that have rs543519978[chr6:30730697]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543519978[chr6:30730697]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30730692 30730697 SP1 TRANSFAC yes 101045900
chr6 30730697 30730708 USF1 JASPAR yes 101045901
chr6 30730697 30730708 USF2 JASPAR yes 101045902
Genes associated with rs543519978[chr6:30730697], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More