EnhancerDB
  1. Home
  2. SNP
  3. rs543540[chr1:239975409]
Enhancers that have rs543540[chr1:239975409]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 239967733 239985595 enh12821
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs543540[chr1:239975409]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 239975400 239975418 MAFF JASPAR yes 36538852
chr1 239975401 239975416 MAFK JASPAR yes 36538856
chr1 239975408 239975418 POU6F2 JASPAR yes 36538857
Genes associated with rs543540[chr1:239975409], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More