EnhancerDB
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Enhancers that have rs543555[chr6:33567622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 33549445 33581115 enh23159
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs543555[chr6:33567622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 33567607 33567627 ESR1 JASPAR yes 101159328
chr6 33567617 33567636 RFX2 JASPAR yes 101159329
chr6 33567619 33567627 MEIS2 JASPAR yes 101159330
chr6 33567619 33567627 MEIS3 JASPAR yes 101159331
chr6 33567619 33567634 RFX5 JASPAR yes 101159332
chr6 33567620 33567624 NFE TRANSFAC yes 101159333
chr6 33567622 33567633 EBF1 JASPAR yes 101159334
Genes associated with rs543555[chr6:33567622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More