EnhancerDB
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  3. rs543556171[chr1:45196632]
Enhancers that have rs543556171[chr1:45196632]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 45192844 45199975 enh313
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543556171[chr1:45196632]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 45196622 45196632 SREBF1 JASPAR yes 28578273
chr1 45196622 45196632 SREBF2 JASPAR yes 28578274
chr1 45196629 45196633 YY1 TRANSFAC yes 28578276
chr1 45196629 45196642 ATF4 JASPAR yes 28578277
Genes associated with rs543556171[chr1:45196632], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More