EnhancerDB
  1. Home
  2. SNP
  3. rs543578450[chr1:9508476]
Enhancers that have rs543578450[chr1:9508476]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9492342 9521379 enh11486
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543578450[chr1:9508476]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9508464 9508476 TFAP2A JASPAR yes 26652169
chr1 9508464 9508476 TFAP2B JASPAR yes 26652170
chr1 9508464 9508477 TFAP2A JASPAR yes 26652171
chr1 9508464 9508477 TFAP2B JASPAR yes 26652172
chr1 9508464 9508477 TFAP2C JASPAR yes 26652173
chr1 9508465 9508476 EBF1 JASPAR yes 26652174
chr1 9508472 9508477 SP1 TRANSFAC yes 26652175
Genes associated with rs543578450[chr1:9508476], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More