EnhancerDB
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  3. rs543586475[chr17:55488521]
Enhancers that have rs543586475[chr17:55488521]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543586475[chr17:55488521]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55488506 55488526 TP63 JASPAR yes 54952237
chr17 55488507 55488525 TP53 JASPAR yes 54952238
chr17 55488507 55488525 TP73 JASPAR yes 54952239
chr17 55488508 55488528 TP53 JASPAR yes 54952240
chr17 55488517 55488536 PAX5 JASPAR yes 54952241
Genes associated with rs543586475[chr17:55488521], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More