EnhancerDB
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  3. rs543614390[chr12:121285107]
Enhancers that have rs543614390[chr12:121285107]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 121282565 121298722 enh2642
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673)
Transcript factors that have rs543614390[chr12:121285107]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 121285092 121285108 POU4F2 JASPAR yes 124188778
chr12 121285092 121285108 POU4F3 JASPAR yes 124188779
chr12 121285093 121285108 FOXA1 JASPAR yes 124188781
chr12 121285094 121285108 POU4F1 JASPAR yes 124188783
chr12 121285094 121285109 FOXP1 JASPAR yes 124188784
chr12 121285094 121285109 HNF1A JASPAR yes 124188785
chr12 121285095 121285107 FOXC2 JASPAR yes 124188786
chr12 121285095 121285109 ONECUT2 JASPAR yes 124188787
chr12 121285095 121285109 ONECUT3 JASPAR yes 124188788
chr12 121285096 121285107 FOXB1 JASPAR yes 124188789
chr12 121285096 121285107 FOXC1 JASPAR yes 124188790
chr12 121285096 121285107 PROP1 JASPAR yes 124188791
chr12 121285097 121285112 FOXA1 JASPAR yes 124188793
chr12 121285098 121285110 FOXI1 JASPAR yes 124188794
chr12 121285098 121285113 FOXP1 JASPAR yes 124188795
chr12 121285099 121285111 FOXC2 JASPAR yes 124188796
chr12 121285099 121285113 ONECUT2 JASPAR yes 124188797
chr12 121285099 121285113 ONECUT3 JASPAR yes 124188798
chr12 121285100 121285111 FOXB1 JASPAR yes 124188799
chr12 121285100 121285111 FOXC1 JASPAR yes 124188800
chr12 121285105 121285109 YY1 TRANSFAC yes 124188802
Genes associated with rs543614390[chr12:121285107], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More