EnhancerDB
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  3. rs543620123[chr1:95258267]
Enhancers that have rs543620123[chr1:95258267]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 95254882 95276775 enh12082
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673) Heart
chr1 95258204 95258621 vista2573
VISTA
Transcript factors that have rs543620123[chr1:95258267]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 95257513 95258287 ZNF274 GTRD no Liver (HepG2) 107815979
chr1 95257526 95258314 ZNF274 GTRD no Liver (HepG2) 107815980
chr1 95257529 95258417 ZNF274 GTRD no Bone Marrow (K562) 107815981
chr1 95257589 95258509 ZNF274 GTRD no Liver (HepG2) 107815983
chr1 95257655 95258267 ZNF274 GTRD no Liver (HepG2) 107815985
chr1 95257664 95258424 ZNF274 GTRD no Bone Marrow (K562) 107815988
chr1 95257684 95258328 ZNF274 GTRD no Bone Marrow (K562) 107815989
chr1 95257685 95258469 ZNF274 GTRD no Bone Marrow (K562) 107815990
chr1 95257685 95258493 ZNF274 GTRD no Bone Marrow (K562) 107815991
chr1 95257742 95258268 ZNF274 GTRD no Liver (HepG2) 107815992
chr1 95257752 95258370 ZNF274 GTRD no Bone Marrow (K562) 107815993
chr1 95257756 95258319 ZNF274 GTRD no Liver (HepG2) 107815994
chr1 95257771 95258314 ZNF274 GTRD no Bone Marrow (K562) 107815997
chr1 95257911 95258461 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815998
chr1 95257936 95258532 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107815999
chr1 95257960 95258415 CTCF UCSC Txn Factor no Conserved 107816000
chr1 95257990 95258346 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816001
chr1 95257995 95258355 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816002
chr1 95258034 95258430 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816003
chr1 95258042 95258372 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816004
chr1 95258046 95258306 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816005
chr1 95258053 95258343 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107816006
chr1 95258058 95258428 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816007
chr1 95258059 95258309 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816008
chr1 95258065 95258295 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107816009
chr1 95258072 95258592 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816010
chr1 95258089 95258307 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816011
chr1 95258089 95258313 SPI1 UCSC Txn Factor no Conserved 107816012
chr1 95258118 95258342 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107816013
chr1 95258260 95258271 FLI1 JASPAR yes 30916670
chr1 95258260 95258271 FLI1 JASPAR yes 118333903
chr1 95258261 95258271 ETV6 JASPAR yes 30916671
chr1 95258261 95258271 ETV6 JASPAR yes 118333904
chr1 95258261 95258272 ELF5 JASPAR yes 30916672
chr1 95258261 95258272 ELF5 JASPAR yes 118333905
chr1 95258261 95258274 ELF1 JASPAR yes 30916673
chr1 95258261 95258274 ELF1 JASPAR yes 118333906
chr1 95258262 95258269 SPI1 JASPAR yes 30916674
chr1 95258262 95258269 SPI1 JASPAR yes 118333907
chr1 95258262 95258270 EHF JASPAR yes 30916675
chr1 95258262 95258270 EHF JASPAR yes 118333908
Genes associated with rs543620123[chr1:95258267], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More