EnhancerDB
  1. Home
  2. SNP
  3. rs543645274[chr1:235245112]
Enhancers that have rs543645274[chr1:235245112]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235240345 235251255 enh12800
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs543645274[chr1:235245112]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235244686 235245504 GATA3 GTRD no Thymus 21403553
chr1 235244988 235245271 ZNF143 GTRD no Epithelial (MCF-7) 21403554
chr1 235245092 235245113 IRF1 JASPAR yes 36349414
chr1 235245097 235245112 FOXP1 JASPAR yes 36349416
chr1 235245097 235245118 IRF1 JASPAR yes 36349417
chr1 235245098 235245113 FOXP1 JASPAR yes 36349418
chr1 235245099 235245114 FOXP1 JASPAR yes 36349419
Genes associated with rs543645274[chr1:235245112], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More