EnhancerDB
  1. Home
  2. SNP
  3. rs543652340[chr2:38929329]
Enhancers that have rs543652340[chr2:38929329]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs543652340[chr2:38929329]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38929313 38929333 TBX19 JASPAR yes 73167011
chr2 38929324 38929334 NFATC3 JASPAR yes 73167019
chr2 38929326 38929333 NFATC2 JASPAR yes 73167020
Genes associated with rs543652340[chr2:38929329], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More