EnhancerDB
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  3. rs543675552[chr1:28749274]
Enhancers that have rs543675552[chr1:28749274]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs543675552[chr1:28749274]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28749264 28749282 ESR2 JASPAR yes 27769439
chr1 28749265 28749280 ESR2 JASPAR yes 27769440
chr1 28749272 28749283 ESRRA JASPAR yes 27769441
chr1 28749274 28749288 EBF1 JASPAR yes 27769442
Genes associated with rs543675552[chr1:28749274], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More