EnhancerDB
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  3. rs543711478[chr17:10028852]
Enhancers that have rs543711478[chr17:10028852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 10015545 10033776 enh4251
Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs543711478[chr17:10028852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 10028727 10029300 ZBTB33 GTRD no Lung (A549) 108239079
chr17 10028752 10029344 ZBTB33 GTRD no Lung (A549) 108239080
chr17 10028769 10029648 ZBTB33 GTRD no Lung (A549) 108239081
chr17 10028769 10029648 ZBTB33 GTRD no Lung (A549) 108239082
chr17 10028773 10029394 ZBTB33 GTRD no Lung (A549) 108239083
chr17 10028784 10029275 ZBTB33 GTRD no Lung (A549) 108239084
chr17 10028796 10029235 ZBTB33 GTRD no Lung (A549) 108239085
chr17 10028807 10029235 ZNF274 GTRD no Liver (HepG2) 108239086
chr17 10028808 10029237 ZBTB33 GTRD no Lung (A549) 108239087
chr17 10028839 10028854 FOXP1 JASPAR yes 53090097
chr17 10028841 10028856 FOXP1 JASPAR yes 53090099
chr17 10028842 10028863 IRF1 JASPAR yes 53090100
chr17 10028843 10028858 FOXP1 JASPAR yes 53090101
chr17 10028843 10028864 IRF1 JASPAR yes 53090102
chr17 10028844 10028865 IRF1 JASPAR yes 53090103
chr17 10028847 10029243 ZNF274 GTRD no Liver (HepG2) 108239088
chr17 10028848 10028863 FOXP1 JASPAR yes 53090104
chr17 10028848 10028869 IRF1 JASPAR yes 53090105
chr17 10028849 10028864 FOXP1 JASPAR yes 53090106
chr17 10028850 10028865 FOXP1 JASPAR yes 53090107
chr17 10028851 10028866 FOXP1 JASPAR yes 53090108
chr17 10028851 10028872 IRF1 JASPAR yes 53090109
chr17 10028852 10028867 FOXP1 JASPAR yes 53090110
Genes associated with rs543711478[chr17:10028852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More