EnhancerDB
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  3. rs543720204[chr2:26291989]
Enhancers that have rs543720204[chr2:26291989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 26273785 26313195 enh5372
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs543720204[chr2:26291989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 26291983 26291997 TCF7L2 JASPAR yes 72521742
chr2 26291988 26292002 POU4F1 JASPAR yes 72521743
chr2 26291988 26292004 POU4F3 JASPAR yes 72521744
Genes associated with rs543720204[chr2:26291989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More