EnhancerDB
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  3. rs543728221[chr1:211910840]
Enhancers that have rs543728221[chr1:211910840]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211903585 211916175 enh908
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Breast Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs543728221[chr1:211910840]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211909765 211913107 TCF7L2 GTRD no Colon (HCT116) 107867568
chr1 211910202 211913426 ZNF274 GTRD no Cervix (HeLa-S3) 21377326
chr1 211910202 211913426 ZNF274 GTRD no Cervix (HeLa-S3) 107867569
chr1 211910346 211910883 ZNF274 GTRD no Cervix (HeLa-S3) 21377327
chr1 211910464 211910871 ZNF274 GTRD no Blood (GM12878) 21377329
chr1 211910485 211910904 ZBTB33 GTRD no Brain (SK-N-SH) 21377330
chr1 211910802 211911234 ZNF274 GTRD no Blood (GM12878) 21377335
chr1 211910826 211910841 TFAP2C JASPAR yes 35080675
chr1 211910829 211910840 EBF1 JASPAR yes 35080676
chr1 211910829 211910842 TFAP2A JASPAR yes 35080677
chr1 211910829 211910842 TFAP2B JASPAR yes 35080678
chr1 211910829 211910842 TFAP2C JASPAR yes 35080679
chr1 211910829 211910843 EBF1 JASPAR yes 35080680
chr1 211910831 211910842 EBF1 JASPAR yes 35080681
chr1 211910836 211910841 SP1 TRANSFAC yes 35080682
Genes associated with rs543728221[chr1:211910840], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More