EnhancerDB
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  3. rs543733158[chr12:71040724]
Enhancers that have rs543733158[chr12:71040724]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 71035785 71044892 enh43768
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Stomach Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr12 71040722 71040853 vista13996
VISTA
Transcript factors that have rs543733158[chr12:71040724]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 71040718 71041000 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108044229
chr12 71040719 71040734 MEF2C JASPAR yes 82432516
chr12 71040719 71040734 MEF2C JASPAR yes 121786160
chr12 71040720 71040741 IRF1 JASPAR yes 82432517
chr12 71040720 71040741 IRF1 JASPAR yes 121786161
chr12 71040721 71040736 FOXP1 JASPAR yes 82432518
chr12 71040721 71040736 FOXP1 JASPAR yes 121786162
chr12 71040723 71040729 TBP TRANSFAC yes 82432519
chr12 71040723 71040729 TBP TRANSFAC yes 121786163
chr12 71040723 71040738 FOXP1 JASPAR yes 82432520
chr12 71040723 71040738 FOXP1 JASPAR yes 121786164
chr12 71040724 71040745 IRF1 JASPAR yes 82432521
chr12 71040724 71040745 IRF1 JASPAR yes 121786165
Genes associated with rs543733158[chr12:71040724], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More