EnhancerDB
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  3. rs543789179[chr1:232061411]
Enhancers that have rs543789179[chr1:232061411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232052045 232079775 enh12783
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs543789179[chr1:232061411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232061407 232061421 GATA2 JASPAR yes 36123877
chr1 232061409 232061417 GATA3 JASPAR yes 36123878
chr1 232061409 232061417 GATA5 JASPAR yes 36123879
Genes associated with rs543789179[chr1:232061411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More