EnhancerDB
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  3. rs543897300[chr16:85549511]
Enhancers that have rs543897300[chr16:85549511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs543897300[chr16:85549511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85548979 85552235 ZNF274 GTRD no Bone Marrow (K562) 21726853
chr16 85548994 85552184 ZNF274 GTRD no Bone Marrow (K562) 21726854
chr16 85549156 85551670 ZNF274 GTRD no Bone Marrow (K562) 21726856
chr16 85549186 85551685 ZNF143 GTRD no Epithelial (MCF-7) 21726857
chr16 85549192 85551732 ZNF143 GTRD no Epithelial (MCF-7) 21726858
chr16 85549192 85552186 ZNF143 GTRD no Epithelial (MCF-7) 21726859
chr16 85549224 85551006 ZNF274 GTRD no Bone Marrow (K562) 21726860
chr16 85549238 85551380 ZNF274 GTRD no Bone Marrow (K562) 21726861
chr16 85549356 85549957 ZNF274 GTRD no Bone Marrow (K562) 21726862
chr16 85549357 85549718 ZNF274 GTRD no Bone Marrow (K562) 21726863
chr16 85549362 85552152 ZNF274 GTRD no Liver (HepG2) 21726864
chr16 85549379 85549681 ZNF274 GTRD no Bone Marrow (K562) 21726865
chr16 85549393 85549735 ZNF274 GTRD no Bone Marrow (K562) 21726866
chr16 85549428 85550044 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21726867
chr16 85549451 85550054 ZBTB33 GTRD no Lung (A549) 21726868
chr16 85549503 85549521 ESR1 JASPAR yes 12070756
chr16 85549508 85549519 E2F6 JASPAR yes 12070757
Genes associated with rs543897300[chr16:85549511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More