EnhancerDB
  1. Home
  2. SNP
  3. rs543902697[chr2:232468968]
Enhancers that have rs543902697[chr2:232468968]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr2 232468888 232470128 vista35158
VISTA
Transcript factors that have rs543902697[chr2:232468968]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232468919 232470064 POLR2A UCSC Txn Factor no Conserved 108435680
chr2 232468950 232469075 GATA2 UCSC Txn Factor no Conserved 108435681
chr2 232468954 232468969 TFAP2A JASPAR yes 22228970
chr2 232468954 232468969 TFAP2C JASPAR yes 22228971
chr2 232468954 232468969 TFAP2A JASPAR yes 81724727
chr2 232468954 232468969 TFAP2C JASPAR yes 81724728
chr2 232468957 232468968 EBF1 JASPAR yes 22228972
chr2 232468957 232468968 EBF1 JASPAR yes 81724729
chr2 232468957 232468969 TFAP2A JASPAR yes 22228973
chr2 232468957 232468969 TFAP2B JASPAR yes 22228974
chr2 232468957 232468969 TFAP2C JASPAR yes 22228975
chr2 232468957 232468969 TFAP2A JASPAR yes 81724730
chr2 232468957 232468969 TFAP2B JASPAR yes 81724731
chr2 232468957 232468969 TFAP2C JASPAR yes 81724732
chr2 232468959 232468968 TFAP2A JASPAR yes 22228976
chr2 232468959 232468968 TFAP2A JASPAR yes 81724733
chr2 232468964 232468968 LFA1 TRANSFAC yes 22228977
chr2 232468964 232468968 LFA1 TRANSFAC yes 81724734
chr2 232468964 232468978 TLX1 JASPAR yes 22228978
chr2 232468964 232468978 TLX1 JASPAR yes 81724735
chr2 232468965 232468974 SNAI2 JASPAR yes 22228979
chr2 232468965 232468974 SNAI2 JASPAR yes 81724736
chr2 232468965 232468976 USF2 JASPAR yes 22228980
chr2 232468965 232468976 USF2 JASPAR yes 81724737
chr2 232468966 232468984 ESR1 JASPAR yes 22228981
chr2 232468966 232468984 ESR1 JASPAR yes 81724738
Genes associated with rs543902697[chr2:232468968], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More