EnhancerDB
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  3. rs543942539[chr1:27351938]
Enhancers that have rs543942539[chr1:27351938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27351515 27365695 enh11658
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Uterus Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs543942539[chr1:27351938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27348414 27352148 ZNF274 GTRD no Bone Marrow (K562) 21325302
chr1 27351938 27351950 FOXC2 JASPAR yes 27669625
chr1 27351938 27351953 STAT2 JASPAR yes 27669626
Genes associated with rs543942539[chr1:27351938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More