EnhancerDB
  1. Home
  2. SNP
  3. rs543946085[chr12:46871890]
Enhancers that have rs543946085[chr12:46871890]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs543946085[chr12:46871890]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46871574 46872199 ZBTB33 GTRD no Brain (SK-N-SH) 21541921
chr12 46871735 46872192 ZBTB33 GTRD no Brain (SK-N-SH) 21541922
chr12 46871889 46871902 ELF1 JASPAR yes 120626863
Genes associated with rs543946085[chr12:46871890], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More