EnhancerDB
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  3. rs543959904[chr1:180498313]
Enhancers that have rs543959904[chr1:180498313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs543959904[chr1:180498313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180497790 180498807 ZNF274 GTRD no Bone Marrow (K562) 21353377
chr1 180498304 180498319 ZIC3 JASPAR yes 33521684
chr1 180498304 180498319 ZIC4 JASPAR yes 33521685
chr1 180498305 180498319 ZIC1 JASPAR yes 33521686
Genes associated with rs543959904[chr1:180498313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More