EnhancerDB
  1. Home
  2. SNP
  3. rs543975901[chr3:8546403]
Enhancers that have rs543975901[chr3:8546403]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 8538945 8574055 enh35162
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs543975901[chr3:8546403]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 8546395 8546407 TAL1 JASPAR yes 297877
chr3 8546397 8546418 IRF1 JASPAR yes 297878
chr3 8546402 8546417 FOXP1 JASPAR yes 297879
chr3 8546403 8546418 FOXP1 JASPAR yes 297880
Genes associated with rs543975901[chr3:8546403], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More