EnhancerDB
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  3. rs543979864[chr2:232486746]
Enhancers that have rs543979864[chr2:232486746]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs543979864[chr2:232486746]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232486739 232486760 IRF1 JASPAR yes 81727340
chr2 232486740 232486761 ZNF263 JASPAR yes 81727341
chr2 232486741 232486762 IRF1 JASPAR yes 81727342
chr2 232486743 232486758 PRDM1 JASPAR yes 81727343
chr2 232486745 232486766 IRF1 JASPAR yes 81727344
Genes associated with rs543979864[chr2:232486746], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More