EnhancerDB
  1. Home
  2. SNP
  3. rs543980830[chr17:25841466]
Enhancers that have rs543980830[chr17:25841466]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs543980830[chr17:25841466]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25841455 25841468 NFKB1 JASPAR yes 53639356
chr17 25841463 25841468 USF2 TRANSFAC yes 53639358
chr17 25841464 25841474 ETV3 JASPAR yes 53639359
Genes associated with rs543980830[chr17:25841466], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More