EnhancerDB
  1. Home
  2. SNP
  3. rs544022421[chr1:212106295]
Enhancers that have rs544022421[chr1:212106295]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs544022421[chr1:212106295]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212105180 212106902 ZNF274 GTRD no Bone Marrow (K562) 21377716
chr1 212105959 212106349 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21377719
chr1 212106281 212106299 RARA JASPAR yes 35093344
chr1 212106287 212106300 NR2F1 JASPAR yes 35093345
chr1 212106289 212106307 RARA JASPAR yes 35093346
chr1 212106290 212106305 ESR2 JASPAR yes 35093347
chr1 212106290 212106310 ESR1 JASPAR yes 35093348
chr1 212106291 212106295 ESR1 TRANSFAC yes 35093349
Genes associated with rs544022421[chr1:212106295], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More