EnhancerDB
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  3. rs544029205[chr12:116892795]
Enhancers that have rs544029205[chr12:116892795]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116889515 116899995 enh15029
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs544029205[chr12:116892795]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116891546 116893536 ZNF143 GTRD no Epithelial (MCF-7) 108061659
chr12 116892221 116892835 ZBTB33 GTRD no Brain (SK-N-SH) 21577041
chr12 116892538 116893134 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21577044
chr12 116892622 116892978 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21577045
chr12 116892679 116893143 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21577046
chr12 116892784 116892795 FOXA1 JASPAR yes 123997433
chr12 116892792 116893048 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21577047
Genes associated with rs544029205[chr12:116892795], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More