EnhancerDB
  1. Home
  2. SNP
  3. rs544040555[chr1:179008100]
Enhancers that have rs544040555[chr1:179008100]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs544040555[chr1:179008100]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 179008087 179008101 TLX1 JASPAR yes 33463036
chr1 179008088 179008102 TLX1 JASPAR yes 33463037
chr1 179008091 179008107 SOX8 JASPAR yes 33463038
chr1 179008096 179008102 TCF4 TRANSFAC yes 33463039
Genes associated with rs544040555[chr1:179008100], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More