EnhancerDB
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  3. rs544275085[chr17:38696594]
Enhancers that have rs544275085[chr17:38696594]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38663309 38720551 enh17141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544275085[chr17:38696594]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38696343 38697280 ZNF143 GTRD no Epithelial (MCF-7) 21755178
chr17 38696343 38697280 ZNF143 GTRD no Epithelial (MCF-7) 108255671
chr17 38696353 38697320 ZNF143 GTRD no Epithelial (MCF-7) 21755179
chr17 38696353 38697320 ZNF143 GTRD no Epithelial (MCF-7) 108255672
chr17 38696408 38696798 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21755180
chr17 38696443 38697105 ZNF274 GTRD no Bone Marrow (K562) 21755181
chr17 38696443 38697105 ZNF274 GTRD no Bone Marrow (K562) 108255673
chr17 38696463 38697364 ZBTB33 GTRD no Lung (A549) 108255674
chr17 38696468 38697083 ZNF274 GTRD no Bone Marrow (K562) 21755182
chr17 38696468 38697083 ZNF274 GTRD no Bone Marrow (K562) 108255675
chr17 38696472 38697358 ZBTB33 GTRD no Lung (A549) 108255676
chr17 38696473 38697077 ZNF274 GTRD no Blood (GM12878) 21755183
chr17 38696473 38697077 ZNF274 GTRD no Blood (GM12878) 108255677
chr17 38696479 38697162 ZNF274 GTRD no Blood (GM12878) 21755184
chr17 38696479 38697162 ZNF274 GTRD no Blood (GM12878) 108255678
chr17 38696481 38697433 ZNF274 GTRD no Blood (GM12878) 21755185
chr17 38696481 38697433 ZNF274 GTRD no Blood (GM12878) 108255679
chr17 38696497 38697182 ZNF274 GTRD no Bone Marrow (K562) 21755186
chr17 38696497 38697182 ZNF274 GTRD no Bone Marrow (K562) 108255680
chr17 38696524 38697043 ZNF143 GTRD no Epithelial (MCF-7) 21755187
chr17 38696524 38697043 ZNF143 GTRD no Epithelial (MCF-7) 108255681
chr17 38696527 38697181 ZBTB33 GTRD no Lung (A549) 108255682
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 21755188
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 108255683
chr17 38696530 38698210 ZNF274 GTRD no Blood (GM12878) 108255684
chr17 38696532 38697105 ZBTB33 GTRD no Lung (A549) 108255685
chr17 38696541 38697062 ZBTB33 GTRD no Lung (A549) 108255686
chr17 38696543 38697108 ZNF274 GTRD no Blood (GM12878) 21755189
chr17 38696543 38697108 ZNF274 GTRD no Blood (GM12878) 108255687
chr17 38696544 38697028 ZNF143 GTRD no Epithelial (MCF-7) 21755190
chr17 38696544 38697028 ZNF143 GTRD no Epithelial (MCF-7) 108255688
chr17 38696545 38696956 ZNF274 GTRD no Bone Marrow (K562) 21755191
chr17 38696545 38696956 ZNF274 GTRD no Bone Marrow (K562) 108255689
chr17 38696553 38697221 ZNF274 GTRD no Liver (HepG2) 21755192
chr17 38696553 38697221 ZNF274 GTRD no Liver (HepG2) 108255690
chr17 38696557 38696996 ZNF274 GTRD no Blood (GM12878) 21755193
chr17 38696557 38696996 ZNF274 GTRD no Blood (GM12878) 108255691
chr17 38696559 38697815 ZBTB33 GTRD no Lung (A549) 108255692
chr17 38696560 38697010 ZNF274 GTRD no Bone Marrow (K562) 21755194
chr17 38696560 38697010 ZNF274 GTRD no Bone Marrow (K562) 108255693
chr17 38696565 38696953 ZNF274 GTRD no Bone Marrow (K562) 21755195
chr17 38696565 38696953 ZNF274 GTRD no Bone Marrow (K562) 108255694
chr17 38696570 38697023 ZNF274 GTRD no Bone Marrow (K562) 21755196
chr17 38696570 38697023 ZNF274 GTRD no Bone Marrow (K562) 108255695
chr17 38696570 38697049 ZNF274 GTRD no Bone Marrow (K562) 21755197
chr17 38696570 38697049 ZNF274 GTRD no Bone Marrow (K562) 108255696
chr17 38696574 38696594 RREB1 JASPAR yes 54223865
chr17 38696576 38696596 RREB1 JASPAR yes 54223867
chr17 38696579 38697251 ZNF274 GTRD no Bone Marrow (K562) 21755198
chr17 38696579 38697251 ZNF274 GTRD no Bone Marrow (K562) 108255697
chr17 38696584 38697042 ZNF274 GTRD no Liver (HepG2) 21755199
chr17 38696584 38697042 ZNF274 GTRD no Liver (HepG2) 108255698
chr17 38696587 38697003 TCF7L2 GTRD no Colon (HCT116) 21755200
chr17 38696587 38697003 TCF7L2 GTRD no Colon (HCT116) 108255699
Genes associated with rs544275085[chr17:38696594], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More