EnhancerDB
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  3. rs544283477[chr1:25060141]
Enhancers that have rs544283477[chr1:25060141]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs544283477[chr1:25060141]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25060135 25060145 SP1 JASPAR yes 27524885
chr1 25060135 25060154 PAX5 JASPAR yes 27524886
chr1 25060138 25060143 SP1 TRANSFAC yes 27524887
Genes associated with rs544283477[chr1:25060141], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More