EnhancerDB
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  3. rs544289023[chr1:212102259]
Enhancers that have rs544289023[chr1:212102259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212081505 212111174 enh12636
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs544289023[chr1:212102259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212101706 212102356 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377656
chr1 212102086 212102650 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377661
chr1 212102086 212102650 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107867620
chr1 212102202 212102642 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21377662
chr1 212102202 212102642 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107867621
chr1 212102247 212102751 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21377663
chr1 212102247 212102751 TCF7L2 UCSC Txn Factor no Conserved 107867622
chr1 212102247 212102751 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107867623
chr1 212102251 212102261 MSC JASPAR yes 35092807
chr1 212102259 212102269 ALX3 JASPAR yes 35092808
chr1 212102259 212102269 EMX1 JASPAR yes 35092809
chr1 212102259 212102269 EMX2 JASPAR yes 35092810
chr1 212102259 212102269 ESX1 JASPAR yes 35092811
chr1 212102259 212102269 EVX2 JASPAR yes 35092812
chr1 212102259 212102269 GBX1 JASPAR yes 35092813
chr1 212102259 212102269 GSX1 JASPAR yes 35092814
chr1 212102259 212102269 GSX2 JASPAR yes 35092815
chr1 212102259 212102269 HOXA2 JASPAR yes 35092816
chr1 212102259 212102269 HOXB2 JASPAR yes 35092817
chr1 212102259 212102269 HOXB3 JASPAR yes 35092818
chr1 212102259 212102269 LBX2 JASPAR yes 35092819
chr1 212102259 212102269 LHX2 JASPAR yes 35092820
chr1 212102259 212102269 LHX6 JASPAR yes 35092821
chr1 212102259 212102269 MIXL1 JASPAR yes 35092822
chr1 212102259 212102269 NOTO JASPAR yes 35092823
Genes associated with rs544289023[chr1:212102259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More