EnhancerDB
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  3. rs544312399[chr12:50910543]
Enhancers that have rs544312399[chr12:50910543]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544312399[chr12:50910543]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50910533 50910544 USF1 JASPAR yes 120836733
chr12 50910533 50910544 USF2 JASPAR yes 120836734
chr12 50910534 50910544 SREBF2 JASPAR yes 120836735
chr12 50910539 50910552 NR2F1 JASPAR yes 120836737
chr12 50910540 50910548 CREB1 JASPAR yes 120836738
chr12 50910541 50910559 RARA JASPAR yes 120836739
chr12 50910543 50910547 ESR1 TRANSFAC yes 120836740
Genes associated with rs544312399[chr12:50910543], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More