EnhancerDB
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  3. rs544324196[chr17:38772226]
Enhancers that have rs544324196[chr17:38772226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs544324196[chr17:38772226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38771566 38772250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21756757
chr17 38771566 38772250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108257703
chr17 38771723 38772233 CTCF UCSC Txn Factor no Conserved 108257715
chr17 38771766 38772242 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21756770
chr17 38771766 38772242 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108257717
chr17 38772223 38772228 GATA1 TRANSFAC yes 54232601
Genes associated with rs544324196[chr17:38772226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More