EnhancerDB
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  3. rs544338276[chr3:56900200]
Enhancers that have rs544338276[chr3:56900200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 56877665 56906735 enh35421
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Lung (PC-9) Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs544338276[chr3:56900200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 56900193 56900208 FOXP1 JASPAR yes 2605705
chr3 56900193 56900214 IRF1 JASPAR yes 2605706
chr3 56900195 56900215 RREB1 JASPAR yes 2605707
chr3 56900198 56900210 IRF1 JASPAR yes 2605708
chr3 56900198 56900213 FOXP1 JASPAR yes 2605709
chr3 56900198 56900219 IRF1 JASPAR yes 2605710
chr3 56900200 56900220 RREB1 JASPAR yes 2605711
Genes associated with rs544338276[chr3:56900200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More