EnhancerDB
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  3. rs544390640[chr6:42266943]
Enhancers that have rs544390640[chr6:42266943]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42254359 42267679 enh38998
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (GM12878) Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs544390640[chr6:42266943]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42266939 42266943 NFE TRANSFAC yes 101706031
chr6 42266939 42266944 GATA1 TRANSFAC yes 101706032
chr6 42266939 42266945 GATA3 JASPAR yes 101706033
chr6 42266943 42266947 NFE TRANSFAC yes 101706034
chr6 42266943 42266948 GATA1 TRANSFAC yes 101706035
chr6 42266943 42266949 GATA3 JASPAR yes 101706036
Genes associated with rs544390640[chr6:42266943], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More