EnhancerDB
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  3. rs544429820[chr1:28735639]
Enhancers that have rs544429820[chr1:28735639]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs544429820[chr1:28735639]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28735621 28735642 IRF1 JASPAR yes 27767018
chr1 28735625 28735646 IRF1 JASPAR yes 27767019
chr1 28735627 28735642 PRDM1 JASPAR yes 27767020
chr1 28735627 28735642 STAT2 JASPAR yes 27767021
chr1 28735628 28735642 SPIC JASPAR yes 27767022
chr1 28735628 28735642 STAT1 JASPAR yes 27767023
chr1 28735629 28735650 IRF1 JASPAR yes 27767024
chr1 28735630 28735645 FOXP1 JASPAR yes 27767025
chr1 28735630 28735651 IRF1 JASPAR yes 27767026
chr1 28735631 28735652 IRF1 JASPAR yes 27767027
chr1 28735632 28735647 FOXP1 JASPAR yes 27767028
chr1 28735634 28735649 FOXP1 JASPAR yes 27767029
chr1 28735635 28735650 FOXP1 JASPAR yes 27767030
chr1 28735636 28735651 FOXP1 JASPAR yes 27767031
chr1 28735637 28735652 FOXP1 JASPAR yes 27767032
chr1 28735638 28735653 FOXP1 JASPAR yes 27767033
Genes associated with rs544429820[chr1:28735639], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More