EnhancerDB
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  3. rs544492894[chr16:89440140]
Enhancers that have rs544492894[chr16:89440140]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544492894[chr16:89440140]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89440127 89440141 GLIS2 JASPAR yes 12337880
chr16 89440129 89440140 E2F4 JASPAR yes 12337882
chr16 89440129 89440140 E2F6 JASPAR yes 12337883
chr16 89440139 89440153 MTF1 JASPAR yes 12337884
Genes associated with rs544492894[chr16:89440140], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More