EnhancerDB
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  3. rs544520426[chr16:89451207]
Enhancers that have rs544520426[chr16:89451207]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 89451016 89451317 vista23569
VISTA
Transcript factors that have rs544520426[chr16:89451207]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89450537 89451263 ZNF274 GTRD no Bone Marrow (K562) 21738411
chr16 89450537 89451263 ZNF274 GTRD no Bone Marrow (K562) 108225876
chr16 89450700 89451867 ZNF274 GTRD no Blood (GM12878) 21738414
chr16 89450700 89451867 ZNF274 GTRD no Blood (GM12878) 108225879
chr16 89451203 89451218 RFX5 JASPAR yes 12339424
chr16 89451203 89451218 RFX5 JASPAR yes 49421499
chr16 89451203 89451223 RREB1 JASPAR yes 12339425
chr16 89451203 89451223 RREB1 JASPAR yes 49421500
Genes associated with rs544520426[chr16:89451207], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More