EnhancerDB
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  3. rs544580228[chr1:234819977]
Enhancers that have rs544580228[chr1:234819977]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234809879 234823595 enh12794
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Stomach Placenta Adrenal Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs544580228[chr1:234819977]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234819780 234820460 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395729
chr1 234819797 234820447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395730
chr1 234819821 234820385 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395731
chr1 234819828 234820444 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395732
chr1 234819852 234820368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395733
chr1 234819867 234820243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395734
chr1 234819876 234820340 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395735
chr1 234819901 234820411 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395736
chr1 234819902 234820358 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395737
chr1 234819907 234820477 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21395738
chr1 234819918 234820318 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395739
chr1 234819921 234820321 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395740
chr1 234819931 234820321 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395741
chr1 234819934 234820330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395742
chr1 234819943 234820313 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395743
chr1 234819955 234820285 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395744
chr1 234819957 234820361 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395745
chr1 234819961 234820297 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395746
chr1 234819965 234820305 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395747
chr1 234819967 234820351 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395748
chr1 234819971 234819986 HNF1A JASPAR yes 36302445
chr1 234819971 234819992 IRF1 JASPAR yes 36302446
chr1 234819972 234819993 IRF1 JASPAR yes 36302447
chr1 234819972 234820332 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395749
chr1 234819977 234819992 FOXP1 JASPAR yes 36302448
chr1 234819977 234819998 IRF1 JASPAR yes 36302449
Genes associated with rs544580228[chr1:234819977], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More