EnhancerDB
  1. Home
  2. SNP
  3. rs544581409[chr1:17890593]
Enhancers that have rs544581409[chr1:17890593]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs544581409[chr1:17890593]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17890588 17890599 E2F1 JASPAR yes 27102325
chr1 17890589 17890600 E2F4 JASPAR yes 27102326
chr1 17890589 17890600 E2F6 JASPAR yes 27102327
chr1 17890593 17890599 MAZ TRANSFAC yes 27102328
Genes associated with rs544581409[chr1:17890593], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More