EnhancerDB
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  3. rs544654604[chr12:125039965]
Enhancers that have rs544654604[chr12:125039965]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs544654604[chr12:125039965]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125039953 125039973 ESR1 JASPAR yes 124393416
chr12 125039957 125039970 NFKB2 JASPAR yes 124393417
chr12 125039957 125039974 ESR1 JASPAR yes 124393418
chr12 125039957 125039975 ESR1 JASPAR yes 124393419
chr12 125039957 125039975 NR3C1 JASPAR yes 124393420
chr12 125039958 125039968 NFKB1 JASPAR yes 124393421
chr12 125039958 125039968 RELA JASPAR yes 124393422
chr12 125039958 125039969 NFKB1 JASPAR yes 124393423
chr12 125039958 125039973 ESR2 JASPAR yes 124393424
chr12 125039958 125039978 ESR1 JASPAR yes 124393425
Genes associated with rs544654604[chr12:125039965], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More