EnhancerDB
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  3. rs544715525[chr1:20818580]
Enhancers that have rs544715525[chr1:20818580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20817763 20825479 enh11584
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Breast Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs544715525[chr1:20818580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20818562 20818582 TP53 JASPAR yes 27250347
chr1 20818572 20818587 TFAP2A JASPAR yes 27250348
chr1 20818572 20818591 REST JASPAR yes 27250349
chr1 20818574 20818589 TFAP2A JASPAR yes 27250350
chr1 20818574 20818589 TFAP2C JASPAR yes 27250351
chr1 20818576 20818585 TFAP2A JASPAR yes 27250352
chr1 20818580 20818585 SP1 TRANSFAC yes 27250353
Genes associated with rs544715525[chr1:20818580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More