EnhancerDB
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  3. rs544721079[chr2:38934024]
Enhancers that have rs544721079[chr2:38934024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs544721079[chr2:38934024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38934017 38934031 PLAG1 JASPAR yes 73167826
chr2 38934018 38934025 SP1 TRANSFAC yes 73167827
chr2 38934018 38934028 SP1 JASPAR yes 73167828
chr2 38934019 38934027 SP1 TRANSFAC yes 73167829
chr2 38934020 38934025 SP1 TRANSFAC yes 73167830
chr2 38934020 38934031 E2F4 JASPAR yes 73167831
chr2 38934021 38934026 SP1 TRANSFAC yes 73167832
chr2 38934021 38934027 SP1 TRANSFAC yes 73167833
chr2 38934021 38934031 SP1 JASPAR yes 73167834
chr2 38934022 38934032 SP1 JASPAR yes 73167835
chr2 38934022 38934032 ZNF740 JASPAR yes 73167836
chr2 38934023 38934035 ZBTB7B JASPAR yes 73167837
chr2 38934023 38934035 ZBTB7C JASPAR yes 73167838
chr2 38934024 38934036 ZBTB7A JASPAR yes 73167839
Genes associated with rs544721079[chr2:38934024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More