EnhancerDB
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  3. rs544799596[chr16:89540782]
Enhancers that have rs544799596[chr16:89540782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs544799596[chr16:89540782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89540771 89540787 ZNF143 JASPAR yes 12348327
chr16 89540775 89540790 ZIC3 JASPAR yes 12348328
chr16 89540775 89540790 ZIC4 JASPAR yes 12348329
chr16 89540776 89540790 GLIS3 JASPAR yes 12348330
chr16 89540776 89540790 ZIC1 JASPAR yes 12348331
Genes associated with rs544799596[chr16:89540782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More