EnhancerDB
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  3. rs544840866[chr1:52025533]
Enhancers that have rs544840866[chr1:52025533]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52012725 52027215 enh11846
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs544840866[chr1:52025533]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52025523 52025535 PKNOX2 JASPAR yes 28850673
chr1 52025526 52025541 FOXP1 JASPAR yes 28850674
chr1 52025532 52025538 TBP TRANSFAC yes 28850675
Genes associated with rs544840866[chr1:52025533], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More