EnhancerDB
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  3. rs544998531[chr2:28945623]
Enhancers that have rs544998531[chr2:28945623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs544998531[chr2:28945623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28945613 28945623 TBX21 JASPAR yes 72674006
chr2 28945614 28945623 ZEB1 JASPAR yes 72674012
chr2 28945614 28945626 PKNOX1 JASPAR yes 72674013
chr2 28945614 28945626 TGIF1 JASPAR yes 72674014
chr2 28945614 28945627 ZBTB18 JASPAR yes 72674015
chr2 28945615 28945625 FIGLA JASPAR yes 72674016
chr2 28945615 28945625 ID4 JASPAR yes 72674017
chr2 28945615 28945625 TCF3 JASPAR yes 72674018
chr2 28945615 28945625 TCF4 JASPAR yes 72674019
chr2 28945616 28945625 SNAI2 JASPAR yes 72674020
Genes associated with rs544998531[chr2:28945623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More