EnhancerDB
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  3. rs545178706[chr1:235248213]
Enhancers that have rs545178706[chr1:235248213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235240345 235251255 enh12800
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs545178706[chr1:235248213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235248209 235248228 PAX5 JASPAR yes 36349878
chr1 235248213 235248224 NFE2L2 JASPAR yes 36349879
Genes associated with rs545178706[chr1:235248213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More