EnhancerDB
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  3. rs545181381[chr1:10450227]
Enhancers that have rs545181381[chr1:10450227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10444465 10451875 enh57
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs545181381[chr1:10450227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10450215 10450236 IRF1 JASPAR yes 26714757
chr1 10450216 10450231 FOXP1 JASPAR yes 26714758
chr1 10450217 10450238 IRF1 JASPAR yes 26714759
chr1 10450219 10450227 GATA3 JASPAR yes 26714760
chr1 10450221 10450236 FOXP1 JASPAR yes 26714761
chr1 10450221 10450242 IRF1 JASPAR yes 26714762
chr1 10450222 10450237 FOXP1 JASPAR yes 26714763
chr1 10450225 10450240 PRDM1 JASPAR yes 26714764
chr1 10450225 10450240 STAT2 JASPAR yes 26714765
Genes associated with rs545181381[chr1:10450227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More